December 2023
仕事納め & 今週の輪読
年末年始の茨城大学は 12/28〜1/3 が一斉休業日となっていて，年末の授業は 1/26 まで，新年の授業は 1/10 から開始です．
今週の輪読では下記の論文を取り上げました．
2309. Verhoeven, A. et al. (2023). The root-knot nematode effector MiMSP32 targets host 12-oxophytodienoate reductase 2 to regulate plant susceptibility. New Phytol. 237: 2360–2374.
2310. Wu, J., Zhu, W., and Zhao, Q. (2023). Salicylic acid biosynthesis is not from phenylalanine in Arabidopsis. J. Integr. Plant Biol. 65: 881–887.
2311. Acharya, U., Das, T., Ghosh, Z., and Ghosh, A. (2022). Defense surveillance system at the interface: response of rice towards Rhizoctonia solani during sheath blight infection. Mol. Plant-Microbe Interact. 35: 1081–1095.
今週の輪読では下記の論文を取り上げました．
2309. Verhoeven, A. et al. (2023). The root-knot nematode effector MiMSP32 targets host 12-oxophytodienoate reductase 2 to regulate plant susceptibility. New Phytol. 237: 2360–2374.
2310. Wu, J., Zhu, W., and Zhao, Q. (2023). Salicylic acid biosynthesis is not from phenylalanine in Arabidopsis. J. Integr. Plant Biol. 65: 881–887.
2311. Acharya, U., Das, T., Ghosh, Z., and Ghosh, A. (2022). Defense surveillance system at the interface: response of rice towards Rhizoctonia solani during sheath blight infection. Mol. Plant-Microbe Interact. 35: 1081–1095.
11/27〜12/22の研究室セミナー & 輪読
またしばらくブログ更新をサボってました．
12/1 の研究室セミナーは化学生態学研究室 4 年生が下記の論文を紹介しました．
Gu, X. et al. (2023). A rapidly spreading deleterious aphid endosymbiont that uses horizontal as well as vertical transmission. Proc. Natl. Acad. Sci. U. S. A. 120: e2217278120.
12/8 の研究室セミナーは化学生態学研究室 4 年生が下記の論文を紹介しました．
Sato, A. et al. (2022). Indole-3-pyruvic acid regulates TAA1 activity, which plays a key role in coordinating the two steps of auxin biosynthesis. Proc. Natl. Acad. Sci. U. S. A. 119: e2203633119.
12/15 の研究室セミナーは化学生態学研究室 4 年生が下記の論文を紹介しました．
Xu, H.-X. et al. (2019). A salivary effector enables whitefly to feed on host plants by eliciting salicylic acid-signaling pathway. Proc. Natl. Acad. Sci. U. S. A. 116: 490–495.
12/22 の研究室セミナーは化学生態学研究室 4 年生が下記の論文を紹介しました．
Suzuki, H., Kato, H., Iwano, M., Nishihama, R., and Kohchi, T. (2023). Auxin signaling is essential for organogenesis but not for cell survival in the liverwort Marchantia polymorpha. The Plant Cell 35: 1058–1075.
11/27〜12/22 の輪読では下記の論文を取り上げました．
2289. Yue, Y., Bao, X., Jiang, J., and Li, J. (2022). Evaluation and correction of injection order effects in LC-MS/MS based targeted metabolomics. J. Chromatogr. B 1212: 123513.
2290. van Dijk, L.J.A., Abdelfattah, A., Ehrlén, J., and Tack, A.J.M. (2022). Soil microbiomes drive aboveground plant–pathogen–insect interactions. Oikos 2022: e09366.
2291. Khattab, I.M., Fischer, J., Kaźmierczak, A., Thines, E., and Nick, P. (2023). Ferulic acid is a putative surrender signal to stimulate programmed cell death in grapevines after infection with Neofusicoccum parvum. Plant Cell Environ. 46: 339–358.
2292. Wang, C.-Y., Li, L.-L., Meiners, S.J., and Kong, C.-H. (2023). Root placement patterns in allelopathic plant–plant interactions. New Phytol. 237: 563–575.
2293. Nguyen-Ngoc, H. et al. (2023). Insight into the role of phytoalexin naringenin and phytohormone abscisic acid in defense against phytopathogens Phytophthora infestans and Magnaporthe oryzae: In vitro and in silico approaches. Physiol. Mol. Plant Pathol. 127: 102123.
2294. Shimada, T. et al. (2024). Characterization of diterpene synthase genes in Brachypodium distachyon, a monocotyledonous model plant, provides evolutionary insight into their multiple homologs in cereals. Biosci. Biotechnol. Biochem. 88: 8–15.
2295. Ji, W., Mandal, S., Rezenom, Y.H., and McKnight, T.D. (2023). Specialized metabolism by trichome-enriched Rubisco and fatty acid synthase components. Plant Physiol. 191: 1199–1213.
2296. Rawat, A.A. et al. (2023). OXIDATIVE SIGNAL-INDUCIBLE1 induces immunity by coordinating N-hydroxypipecolic acid, salicylic acid, and camalexin synthesis. New Phytol. 237: 1285–1301.
2297. Fu, J. et al. (2023). ZmEREB92 interacts with ZmMYC2 to activate maize terpenoid phytoalexin biosynthesis upon Fusarium graminearum infection through jasmonic acid/ethylene signaling. New Phytol. 237: 1302–1319.
2298. Qi, F. et al. (2022). Microbial production of the plant-derived fungicide physcion. Metab. Eng. 74: 130–138.
2299. Li, Z.-X. et al. (2023). Widely targeted metabolomics analysis reveals the effect of exogenous auxin on postharvest resistance to Botrytis cinerea in kiwifruit (Actinidia chinensis L.). Postharvest Biol. Technol. 195: 112129.
2300. Daware, A. et al. (2023). Rice Pangenome Genotyping Array: an efficient genotyping solution for pangenome-based accelerated genetic improvement in rice. Plant J. 113: 26–46.
2301. Nie, Y. et al. (2022). A novel elicitor MoVcpo is necessary for the virulence of Magnaporthe oryzae and triggers rice defense responses. Front. Plant Sci. 13: 1018616.
2302. Suzuki, R. et al. (2022). Local auxin synthesis mediated by YUCCA4 induced during root-knot nematode infection positively regulates gall growth and nematode development. Front. Plant Sci. 13: 1019427.
2303. Li, R. et al. (2023). Melatonin functions as a broad-spectrum antifungal by targeting a conserved pathogen protein kinase. J. Pineal Res. 74: e12839.
2304. Pan, X. et al. (2022). Discovery, structure, and mechanism of a class II sesquiterpene cyclase. J. Am. Chem. Soc. 144: 22067–22074.
2305. Pacheco-Hernández, Y., Villa-Ruano, N., Cruz-Duran, R., Becerra-Martínez, E., and Lozoya-Gloria, E. (2022). 1H-NMR metabolomics profiling and volatile content of ‘Hoja Santa’ (Piper auritum Kunth): a millenary edible plant consumed in Mexico. Chem. Biodiversity 19: e202200667.
2306. Poveda, J., Abril-Urías, P., Muñoz-Acero, J., and Nicolás, C. (2022). A potential role of salicylic acid in the evolutionary behavior of Trichoderma as a plant pathogen: from Marchantia polymorpha to Arabidopsis thaliana. Planta 257: 6.
2307. Wang, K. et al. (2023). E3 ubiquitin ligase OsPIE3 destabilises the B-lectin receptor-like kinase PID2 to control blast disease resistance in rice. New Phytol. 237: 1826–1842.
2308. Li, L.-L., Li, Z., Lou, Y., Meiners, S.J., and Kong, C.-H. (2023). (−)-Loliolide is a general signal of plant stress that activates jasmonate-related responses. New Phytol. 238: 2099–2112.
12/1 の研究室セミナーは化学生態学研究室 4 年生が下記の論文を紹介しました．
Gu, X. et al. (2023). A rapidly spreading deleterious aphid endosymbiont that uses horizontal as well as vertical transmission. Proc. Natl. Acad. Sci. U. S. A. 120: e2217278120.
12/8 の研究室セミナーは化学生態学研究室 4 年生が下記の論文を紹介しました．
Sato, A. et al. (2022). Indole-3-pyruvic acid regulates TAA1 activity, which plays a key role in coordinating the two steps of auxin biosynthesis. Proc. Natl. Acad. Sci. U. S. A. 119: e2203633119.
12/15 の研究室セミナーは化学生態学研究室 4 年生が下記の論文を紹介しました．
Xu, H.-X. et al. (2019). A salivary effector enables whitefly to feed on host plants by eliciting salicylic acid-signaling pathway. Proc. Natl. Acad. Sci. U. S. A. 116: 490–495.
12/22 の研究室セミナーは化学生態学研究室 4 年生が下記の論文を紹介しました．
Suzuki, H., Kato, H., Iwano, M., Nishihama, R., and Kohchi, T. (2023). Auxin signaling is essential for organogenesis but not for cell survival in the liverwort Marchantia polymorpha. The Plant Cell 35: 1058–1075.
11/27〜12/22 の輪読では下記の論文を取り上げました．
2289. Yue, Y., Bao, X., Jiang, J., and Li, J. (2022). Evaluation and correction of injection order effects in LC-MS/MS based targeted metabolomics. J. Chromatogr. B 1212: 123513.
2290. van Dijk, L.J.A., Abdelfattah, A., Ehrlén, J., and Tack, A.J.M. (2022). Soil microbiomes drive aboveground plant–pathogen–insect interactions. Oikos 2022: e09366.
2291. Khattab, I.M., Fischer, J., Kaźmierczak, A., Thines, E., and Nick, P. (2023). Ferulic acid is a putative surrender signal to stimulate programmed cell death in grapevines after infection with Neofusicoccum parvum. Plant Cell Environ. 46: 339–358.
2292. Wang, C.-Y., Li, L.-L., Meiners, S.J., and Kong, C.-H. (2023). Root placement patterns in allelopathic plant–plant interactions. New Phytol. 237: 563–575.
2293. Nguyen-Ngoc, H. et al. (2023). Insight into the role of phytoalexin naringenin and phytohormone abscisic acid in defense against phytopathogens Phytophthora infestans and Magnaporthe oryzae: In vitro and in silico approaches. Physiol. Mol. Plant Pathol. 127: 102123.
2294. Shimada, T. et al. (2024). Characterization of diterpene synthase genes in Brachypodium distachyon, a monocotyledonous model plant, provides evolutionary insight into their multiple homologs in cereals. Biosci. Biotechnol. Biochem. 88: 8–15.
2295. Ji, W., Mandal, S., Rezenom, Y.H., and McKnight, T.D. (2023). Specialized metabolism by trichome-enriched Rubisco and fatty acid synthase components. Plant Physiol. 191: 1199–1213.
2296. Rawat, A.A. et al. (2023). OXIDATIVE SIGNAL-INDUCIBLE1 induces immunity by coordinating N-hydroxypipecolic acid, salicylic acid, and camalexin synthesis. New Phytol. 237: 1285–1301.
2297. Fu, J. et al. (2023). ZmEREB92 interacts with ZmMYC2 to activate maize terpenoid phytoalexin biosynthesis upon Fusarium graminearum infection through jasmonic acid/ethylene signaling. New Phytol. 237: 1302–1319.
2298. Qi, F. et al. (2022). Microbial production of the plant-derived fungicide physcion. Metab. Eng. 74: 130–138.
2299. Li, Z.-X. et al. (2023). Widely targeted metabolomics analysis reveals the effect of exogenous auxin on postharvest resistance to Botrytis cinerea in kiwifruit (Actinidia chinensis L.). Postharvest Biol. Technol. 195: 112129.
2300. Daware, A. et al. (2023). Rice Pangenome Genotyping Array: an efficient genotyping solution for pangenome-based accelerated genetic improvement in rice. Plant J. 113: 26–46.
2301. Nie, Y. et al. (2022). A novel elicitor MoVcpo is necessary for the virulence of Magnaporthe oryzae and triggers rice defense responses. Front. Plant Sci. 13: 1018616.
2302. Suzuki, R. et al. (2022). Local auxin synthesis mediated by YUCCA4 induced during root-knot nematode infection positively regulates gall growth and nematode development. Front. Plant Sci. 13: 1019427.
2303. Li, R. et al. (2023). Melatonin functions as a broad-spectrum antifungal by targeting a conserved pathogen protein kinase. J. Pineal Res. 74: e12839.
2304. Pan, X. et al. (2022). Discovery, structure, and mechanism of a class II sesquiterpene cyclase. J. Am. Chem. Soc. 144: 22067–22074.
2305. Pacheco-Hernández, Y., Villa-Ruano, N., Cruz-Duran, R., Becerra-Martínez, E., and Lozoya-Gloria, E. (2022). 1H-NMR metabolomics profiling and volatile content of ‘Hoja Santa’ (Piper auritum Kunth): a millenary edible plant consumed in Mexico. Chem. Biodiversity 19: e202200667.
2306. Poveda, J., Abril-Urías, P., Muñoz-Acero, J., and Nicolás, C. (2022). A potential role of salicylic acid in the evolutionary behavior of Trichoderma as a plant pathogen: from Marchantia polymorpha to Arabidopsis thaliana. Planta 257: 6.
2307. Wang, K. et al. (2023). E3 ubiquitin ligase OsPIE3 destabilises the B-lectin receptor-like kinase PID2 to control blast disease resistance in rice. New Phytol. 237: 1826–1842.
2308. Li, L.-L., Li, Z., Lou, Y., Meiners, S.J., and Kong, C.-H. (2023). (−)-Loliolide is a general signal of plant stress that activates jasmonate-related responses. New Phytol. 238: 2099–2112.